Cheap Flights from Guayaquil to San Cristobal

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Compare Guayaquil to San Cristobal flight deals

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Flight deals from Guayaquil to San Cristobal

Looking for a cheap last-minute deal or the best return flight from Guayaquil Airport to San Cristobal Airport? If you want to travel next month, return fares start from $422. Find the lowest prices on one-way and return tickets right here.

San Cristobal.$422 per passenger.Departing Tue, 15 Jun, returning Sun, 20 Jun.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 15 Jun, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Sun, 20 Jun, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Wed, 25 Nov, returning Tue, 1 Dec.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Wed, 25 Nov, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Tue, 1 Dec, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Fri, 5 Feb, returning Wed, 10 Feb.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Fri, 5 Feb, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Wed, 10 Feb, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Mon, 12 Oct, returning Sat, 17 Oct.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Mon, 12 Oct, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Sat, 17 Oct, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Tue, 16 Mar, returning Tue, 23 Mar.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 16 Mar, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Tue, 23 Mar, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Tue, 19 Jan, returning Sat, 23 Jan.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 19 Jan, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Sat, 23 Jan, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Mon, 5 Apr, returning Thu, 8 Apr.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Mon, 5 Apr, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Thu, 8 Apr, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Tue, 1 Sep, returning Wed, 9 Sep.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 1 Sep, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Wed, 9 Sep, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Tue, 1 Dec, returning Fri, 4 Dec.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 1 Dec, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Fri, 4 Dec, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Fri, 12 Mar, returning Thu, 1 Apr.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Fri, 12 Mar, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Thu, 1 Apr, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Mon, 19 Jul, returning Thu, 22 Jul.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Mon, 19 Jul, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Thu, 22 Jul, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$422 per passenger.Departing Tue, 10 Nov, returning Sat, 14 Nov.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 10 Nov, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Sat, 14 Nov, arriving in Guayaquil.Price includes taxes and charges.From $422, select.

San Cristobal.$423 per passenger.Departing Tue, 27 Apr, returning Fri, 7 May.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Tue, 27 Apr, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Fri, 7 May, arriving in Guayaquil.Price includes taxes and charges.From $423, select.

San Cristobal.$430 per passenger.Departing Sat, 29 Aug, returning Sat, 19 Sep.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Sat, 29 Aug, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Sat, 19 Sep, arriving in Guayaquil.Price includes taxes and charges.From $430, select.

San Cristobal.$431 per passenger.Departing Wed, 30 Sep, returning Fri, 2 Oct.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Wed, 30 Sep, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Fri, 2 Oct, arriving in Guayaquil.Price includes taxes and charges.From $431, select.

San Cristobal.$445 per passenger.Departing Mon, 26 Jul, returning Mon, 2 Aug.Return flight with Avianca.Outbound direct flight with Avianca departs from Guayaquil on Mon, 26 Jul, arriving in San Cristobal.Inbound direct flight with Avianca departs from San Cristobal on Mon, 2 Aug, arriving in Guayaquil.Price includes taxes and charges.From $445, select.

Find the cheapest month to fly from Guayaquil to San Cristobal

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Guayaquil to San Cristobal flights are currently cheapest in September.

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Direct flights from Guayaquil to San Cristobal

Guayaquil to San Cristobal: Alternative routes

Compare routes from Guayaquil to San Cristobal below. You may find an airport to fly into that's cheaper, faster, or easier than San Cristobal.

San Cristobal

6km from central San Cristobal

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from $422

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Guayaquil to San Cristobal: Flight information

The things to know before you go.

Cheapest flight found	$422
Cheapest month to fly	December
Average flight time	1 hr, 50 mins
Most popular airline	Avianca Ecuador
Average flights per week	36

Finding cheap flights from Guayaquil to San Cristobal: Frequently asked questions

How much are return flights from Guayaquil to San Cristobal?

The best price we found for a return flight from Guayaquil to San Cristobal is $422. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.

How long does it take to fly from Guayaquil to San Cristobal?

1 hour and 50 minutes is the average flight time from Guayaquil to San Cristobal.

Which airlines fly direct from Guayaquil to San Cristobal?

Avianca Ecuador, Avianca and LATAM Airlines fly direct from Guayaquil to San Cristobal.

How many flights are there a week from Guayaquil to San Cristobal?

As of August 2026, there are 36 flights per week flying from Guayaquil to San Cristobal.

When is the cheapest time to fly from Guayaquil to San Cristobal?

The cheapest month to fly from Guayaquil to San Cristobal is usually December.

Which upcoming date is cheapest to fly from Guayaquil Airport to San Cristobal Airport on?

After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Guayaquil Airport to San Cristobal Airport on Tuesday, 1 December 2026.

Can I get a direct flight from Guayaquil Airport to San Cristobal Airport?

Yes – the average flight time is 1 hour and 50 minutes.

How can I find the best flight deal to San Cristobal?

We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to San Cristobal but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

When is the best time to book flights to San Cristobal?

We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to San Cristobal is around 40 days in advance, so don’t leave your flight to the last minute.

Which is the cheapest airline to fly from Guayaquil Airport to San Cristobal with?

Currently, Avianca offers the cheapest flight tickets to San Cristobal.

Flying from Guayaquil Airport (GYE) to San Cristobal Airport (SCY): what you need to know

Around 1 hour 50 minutes is how long you'll be travelling on a direct flight from Guayaquil Airport to San Cristobal Airport.
Take your pick of 18 weekly Guayaquil Airport to San Cristobal Airport flights. The 08:57 departure with LATAM Airlines is the earliest flight you can take. LATAM Airlines operates the last service of the day at 13:51.
Arrive at the airport on time so you don't miss your GYE to SCY flight. Be there at least two hours ahead for international flights and an hour early for domestic departures to avoid sprinting to your gate.
During popular months such as July, it's best to get to the airport well in advance. Plan to arrive two hours before domestic departures and four hours ahead of an international flight when you fly during peak periods in general.
Flying into San Cristobal (and then discovering more of Ecuador!) is a cinch with LATAM Airlines. This popular carrier has direct flights from Guayaquil Airport to San Cristobal Airport.
The majority of travellers choose to travel with LATAM Airlines on this route.
LATAM Airlines is the most punctual carrier that offers GYE to SCY flights. An exceptional 91.03% of its departures on this route arrive as planned.

How to find the cheapest flights from Guayaquil Airport (GYE) to San Cristobal Airport (SCY)

Currently, $216 is the lowest price we've found for a one-way Guayaquil Airport to San Cristobal Airport flight. The best price for a return ticket is $422. Bear in mind that fares may change due to demand at the time of booking.
Book 11 months before you want to fly. After looking at the numbers on our calendar, this is how far you should book ahead to find cheap tickets from GYE to SCY.
The cheapest month for flights from Guayaquil Airport to San Cristobal Airport is April. Use the 'Whole month' tool to find the lowest prices if you have a flexible travel schedule.
Getting your hands on cheap flights from GYE to SCY is easy with Price Alerts. All you need to do is set up one of these automatic alerts and we'll get in touch when a lower fare pops up.
Secure the ideal flight for you by using the filters. To see the 'Best,' 'Cheapest' or 'Fastest' flights from Guayaquil Airport to San Cristobal Airport, use the 'Sort by' function. You can also filter results by arrival and departure times, airline, and journey duration.

Handy information about Guayaquil Airport (GYE)

Guayaquil Airport earns top marks for on-time performance. 90% of flights that depart GYE land on time.
Guayaquil Airport is around 8 kilometres from central Guayaquil. If you're driving, ride-sharing or catching a taxi from the centre, it'll take 20 minutes or so to arrive, depending on the traffic.
Expect a trip time of about 35 minutes on public transport.
Booked an early flight from Guayaquil Airport to San Cristobal Airport? Avoid the last-minute rush to the airport (and get some extra shut-eye) by picking one of these hotels close to GYE:

Arriving at San Cristobal Airport (SCY)

The last thing you need is a long journey to your hotel if you're landing late on a Guayaquil Airport to San Cristobal Airport flight. Book one of these accommodation options near SCY instead:

When to fly to San Cristobal Airport (SCY)

It's time to work out your dates for your flight from Guayaquil Airport to San Cristobal Airport. August is the most popular month to visit San Cristobal. If you'd like a quieter vibe, go in March.
Lock in your flight from Guayaquil Airport to San Cristobal Airport for March if you'd like to visit San Cristobal during its warmest month. Expect temperatures of between 24ºC and 28ºC.
For cooler conditions, look for a cheap ticket from GYE to SCY in September. Temperatures average between 18ºC and 23ºC then.

Explore more of Ecuador

San Cristobal has plenty to offer, but there are so many other corners of Ecuador waiting to be discovered. About 88 kilometres west of San Cristobal, a trip to Puerto Ayora will fill your itinerary to the brim. Don't miss top attractions like Tortuga Bay, Galapagos Path and Charles Darwin Research Station.
If you're looking to explore another side of Ecuador, consider Puerto Baquerizo Moreno, roughly 5 kilometres west of San Cristobal. Playa Tijeretas, Malecón San Cristobal and Playa de los lobos are key highlights.