Cheap Flights from Mactan-Cebu International to Kota Kinabalu

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Compare Mactan-Cebu International to Kota Kinabalu flight deals

Find the cheapest month or even day of the year to fly to Kota Kinabalu

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Flight deals from Mactan-Cebu International to Kota Kinabalu

Looking for a cheap last-minute deal or the best return flight from Mactan-Cebu International Airport to Kota Kinabalu Airport? If you want to travel next month, return fares start from $390. Find the lowest prices on one-way and return tickets right here.

Kota Kinabalu.$390 per passenger.Departing Mon, 19 Oct, returning Mon, 26 Oct.Return flight with Philippines AirAsia.Outbound indirect flight with Philippines AirAsia, departs from Mactan-Cebu International on Mon, 19 Oct, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Mon, 26 Oct, arriving in Mactan-Cebu International.Price includes taxes and charges.From $390, select.

Kota Kinabalu.$395 per passenger.Departing Wed, 10 Mar, returning Tue, 16 Mar.Return flight with Scoot.Outbound indirect flight with Scoot, departs from Mactan-Cebu International on Wed, 10 Mar, arriving in Kota Kinabalu.Inbound indirect flight with Scoot, departs from Kota Kinabalu on Tue, 16 Mar, arriving in Mactan-Cebu International.Price includes taxes and charges.From $395, select.

Kota Kinabalu.$396 per passenger.Departing Sun, 8 Nov, returning Sun, 15 Nov.Return flight with Philippines AirAsia.Outbound indirect flight with Philippines AirAsia, departs from Mactan-Cebu International on Sun, 8 Nov, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Sun, 15 Nov, arriving in Mactan-Cebu International.Price includes taxes and charges.From $396, select.

Kota Kinabalu.$399 per passenger.Departing Fri, 27 Nov, returning Mon, 7 Dec.Return flight with Cebu Pacific and Philippines AirAsia.Outbound indirect flight with Cebu Pacific, departs from Mactan-Cebu International on Fri, 27 Nov, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Mon, 7 Dec, arriving in Mactan-Cebu International.Price includes taxes and charges.From $399, select.

Kota Kinabalu.$400 per passenger.Departing Mon, 26 Oct, returning Mon, 2 Nov.Return flight with Cebu Pacific and Philippines AirAsia.Outbound indirect flight with Cebu Pacific, departs from Mactan-Cebu International on Mon, 26 Oct, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Mon, 2 Nov, arriving in Mactan-Cebu International.Price includes taxes and charges.From $400, select.

Kota Kinabalu.$405 per passenger.Departing Sat, 24 Apr, returning Tue, 27 Apr.Return flight with Scoot.Outbound indirect flight with Scoot, departs from Mactan-Cebu International on Sat, 24 Apr, arriving in Kota Kinabalu.Inbound indirect flight with Scoot, departs from Kota Kinabalu on Tue, 27 Apr, arriving in Mactan-Cebu International.Price includes taxes and charges.From $405, select.

Kota Kinabalu.$413 per passenger.Departing Fri, 25 Dec, returning Fri, 8 Jan.Return flight with Cebu Pacific and Philippines AirAsia.Outbound indirect flight with Cebu Pacific, departs from Mactan-Cebu International on Fri, 25 Dec, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Fri, 8 Jan, arriving in Mactan-Cebu International.Price includes taxes and charges.From $413, select.

Kota Kinabalu.$431 per passenger.Departing Wed, 6 Jan, returning Sun, 10 Jan.Return flight with Cebu Pacific and Philippines AirAsia.Outbound indirect flight with Cebu Pacific, departs from Mactan-Cebu International on Wed, 6 Jan, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Sun, 10 Jan, arriving in Mactan-Cebu International.Price includes taxes and charges.From $431, select.

Kota Kinabalu.$436 per passenger.Departing Fri, 19 Feb, returning Sun, 21 Feb.Return flight with Philippines AirAsia.Outbound indirect flight with Philippines AirAsia, departs from Mactan-Cebu International on Fri, 19 Feb, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Sun, 21 Feb, arriving in Mactan-Cebu International.Price includes taxes and charges.From $436, select.

Kota Kinabalu.$532 per passenger.Departing Wed, 23 Jun, returning Sun, 27 Jun.Return flight with Scoot and AirAsia.Outbound indirect flight with Scoot, departs from Mactan-Cebu International on Wed, 23 Jun, arriving in Kota Kinabalu.Inbound indirect flight with AirAsia, departs from Kota Kinabalu on Sun, 27 Jun, arriving in Mactan-Cebu International.Price includes taxes and charges.From $532, select.

Kota Kinabalu.$581 per passenger.Departing Wed, 16 Dec, returning Sun, 20 Dec.Return flight with Philippines AirAsia.Outbound indirect flight with Philippines AirAsia, departs from Mactan-Cebu International on Wed, 16 Dec, arriving in Kota Kinabalu.Inbound indirect flight with Philippines AirAsia, departs from Kota Kinabalu on Sun, 20 Dec, arriving in Mactan-Cebu International.Price includes taxes and charges.From $581, select.

Kota Kinabalu.$599 per passenger.Departing Thu, 29 Apr, returning Wed, 5 May.Return flight with Scoot.Outbound indirect flight with Scoot, departs from Mactan-Cebu International on Thu, 29 Apr, arriving in Kota Kinabalu.Inbound indirect flight with Scoot, departs from Kota Kinabalu on Wed, 5 May, arriving in Mactan-Cebu International.Price includes taxes and charges.From $599, select.

Kota Kinabalu.$660 per passenger.Departing Fri, 25 Sep, returning Sun, 11 Oct.Return flight with Philippines AirAsia and AirAsia.Outbound indirect flight with Philippines AirAsia, departs from Mactan-Cebu International on Fri, 25 Sep, arriving in Kota Kinabalu.Inbound indirect flight with AirAsia, departs from Kota Kinabalu on Sun, 11 Oct, arriving in Mactan-Cebu International.Price includes taxes and charges.From $660, select.

Kota Kinabalu.$713 per passenger.Departing Thu, 13 May, returning Sun, 16 May.Return flight with Scoot.Outbound indirect flight with Scoot, departs from Mactan-Cebu International on Thu, 13 May, arriving in Kota Kinabalu.Inbound indirect flight with Scoot, departs from Kota Kinabalu on Sun, 16 May, arriving in Mactan-Cebu International.Price includes taxes and charges.From $713, select.

Kota Kinabalu.$1,507 per passenger.Departing Tue, 29 Sep, returning Tue, 29 Sep.Return flight with Scoot and Malaysia Airlines.Outbound indirect flight with Scoot, departs from Mactan-Cebu International on Tue, 29 Sep, arriving in Kota Kinabalu.Inbound indirect flight with Malaysia Airlines, departs from Kota Kinabalu on Tue, 29 Sep, arriving in Mactan-Cebu International.Price includes taxes and charges.From $1,507, select.

Find the cheapest month to fly from Mactan-Cebu International to Kota Kinabalu

We’re always keeping an eye on fares, so you can find the best one in seconds. It looks like Mactan-Cebu International to Kota Kinabalu flights are currently cheapest in October.

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Cebu to Kota Kinabalu: Flight information

The things to know before you go.

Cheapest flight found	$390
Cheapest month to fly	October

Finding cheap flights from Mactan-Cebu International to Kota Kinabalu: Frequently asked questions

How much are return flights from Mactan-Cebu International to Kota Kinabalu?

The best price we found for a return flight from Mactan-Cebu International to Kota Kinabalu is $390. This is an estimate based on information collected from different airlines and travel providers over the last 4 days and is subject to change and availability.

Which airlines fly direct from Mactan-Cebu International to Kota Kinabalu?

Currently, there are no airlines that fly direct from Mactan-Cebu International to Kota Kinabalu. But we found flights with one or more stops from $390.

How many flights are there a week from Mactan-Cebu International to Kota Kinabalu?

As of September 2026, there are no flights flying from Mactan-Cebu International to Kota Kinabalu.

When is the cheapest time to fly from Mactan-Cebu International to Kota Kinabalu?

The cheapest month to fly from Mactan-Cebu International to Kota Kinabalu is usually October.

Which upcoming date is cheapest to fly from Mactan-Cebu International Airport to Kota Kinabalu Airport on?

After crunching the numbers on our flight calendar, we found that it's currently cheapest to fly from Mactan-Cebu International Airport to Kota Kinabalu Airport on Monday, 19 October 2026.

Can I get a direct flight from Mactan-Cebu International Airport to Kota Kinabalu Airport?

No airlines currently offer direct flights between Mactan-Cebu International Airport and Kota Kinabalu Airport. Most routes have one or more stops.

How can I find the best flight deal to Kota Kinabalu?

We show every price from over 1,200 airlines and travel agents, comparing them all so you don’t have to. If you know you want to fly to Kota Kinabalu but you’re not ready to book, set up a Price Alert. We’ll track prices for you, and let you know when they rise or fall.

When is the best time to book flights to Kota Kinabalu?

We crunched all the numbers in our flight calendar and it looks like the cheapest time to book a flight to Kota Kinabalu is around 40 days in advance, so don’t leave your flight to the last minute.

Which is the cheapest airline to fly from Mactan-Cebu International Airport to Kota Kinabalu with?

Currently, Philippines AirAsia offers the cheapest flight tickets to Kota Kinabalu.

Flying from Mactan-Cebu International Airport (CEB) to Kota Kinabalu Airport (BKI): what you need to know

Cebu and Kota Kinabalu share the UTC+8 timezone. This means there's no time difference to consider.
Get to the airport on time so you don't miss your CEB to BKI flight. Be there at least two hours ahead for international flights and an hour early for domestic departures to avoid the stress of rushing.
You can expect bigger queues during popular months such as April. Arriving up to four hours in advance for an international flight and two hours for domestic departures will give you ample time for security and boarding.
Think about adding a stopover when booking your ticket from Mactan-Cebu International Airport to Kota Kinabalu Airport. Simply uncheck 'Direct flights only' to break up your trip, or enjoy a detour to a new and interesting place. Check out these options between CEB and BKI:
- Incheon International Airport
- Hong Kong Intl Airport
- Tokyo Narita Airport

How to find the cheapest flights from Mactan-Cebu International Airport (CEB) to Kota Kinabalu Airport (BKI)

$182 is currently the best price for a one-way Mactan-Cebu International Airport to Kota Kinabalu Airport flight. A return flight starts from $390. These fares can change based on availability.
Don't leave things to the last moment. You're more likely to find cheap tickets from CEB to BKI if you book ahead. Airlines often offer some amazing early bird rates.
Finding cheap flights from Mactan-Cebu International Airport to Kota Kinabalu Airport is easier if you're flexible with your travel dates. Use the 'Whole month' search tool to see the lowest fares throughout the month and land a great deal.
Save time searching for cheap flights from CEB to BKI by setting up a Price Alert. You'll get an email or notification through the app when a new low fare is offered.
Tailor your trip with filters. Select your departure and arrival times, airlines and total journey duration. You can also sort the results by 'Cheapest,' 'Best' or 'Fastest' flights from Mactan-Cebu International Airport to Kota Kinabalu Airport.

Handy information about Mactan-Cebu International Airport (CEB)

Of all flights departing from Mactan-Cebu International Airport, 69% land on time at their destination.
Central Cebu to Mactan-Cebu International Airport is around 11 kilometres. Depending on traffic, it'll take you about 30 minutes to get there if you're catching a taxi, ride-sharing or driving.
The journey on public transport takes roughly 50 minutes.
Need a handy hotel near CEB? If you're boarding an early flight from Mactan-Cebu International Airport to Kota Kinabalu Airport, these stays will have you moments from check-in:

Arriving at Kota Kinabalu Airport (BKI)

If you're getting in on a late Mactan-Cebu International Airport to Kota Kinabalu Airport flight, few things top the convenience of being near the terminal. Grab your suitcases from the carousel and then be showered and resting not long after at one of these hotels near BKI:
Get on the fast track to adventure by picking up a Kota Kinabalu Airport rental car. Grab a set of wheels from NH Travel, Green Motion or Keddy By Europcar and experience the lesser-explored corners of Kota Kinabalu and beyond.
For the best deal, reserve your vehicle from Kota Kinabalu Airport about one week before travelling.

Getting from Kota Kinabalu Airport (BKI) to central Kota Kinabalu

From Kota Kinabalu Airport, Kota Kinabalu is approximately 8 kilometres away. It takes around 20 minutes to reach the centre by car.
If you're taking public transport, expect a journey time of around 35 minutes.

When to fly to Kota Kinabalu Airport (BKI)

It's time to choose your travel dates for your flight from Mactan-Cebu International Airport to Kota Kinabalu Airport. August is the busiest month to visit Kota Kinabalu. If you want a more low-key vibe, go in March.
Book your flight from Mactan-Cebu International Airport to Kota Kinabalu Airport for May if you want to visit Kota Kinabalu during its warmest month. You can expect temperatures of between 24ºC and 31ºC.
If you want cooler conditions, look for a cheap ticket from CEB to BKI in February. Average temperatures are between 23ºC and 29ºC then.

Explore more of Malaysia

Sandakan is just one of the many places in Malaysia waiting to be explored after you've seen Kota Kinabalu. Around 225 kilometres away to the east, well-known attractions include Sepilok Orangutan Rehabilitation Centre, Sun Bear Conservation Centre, Sepilok and Sandakan Rainforest Park.
If you want to check out another corner of Malaysia, consider Tawau, about 274 kilometres south-east of Kota Kinabalu. Hot Springs Tawau, Teck Guan Cocoa Museum and Batu payung are key reasons to visit.